Type: object
Description: A group of individuals related in some phenotypic or genotypic aspect

Properties

description

• type: string

description about the cohort

description Value Example

"this is a description about the cohort"

htsFiles

• type: array of “https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/HtsFile.json [LINK]”

Pointer to the relevant HTS file(s) for the cohort

htsFiles Value Example

{
   "htsFormat" : "GVCF",
   "uri" : "file://data/genomes/file1.vcf.gz"
}

id

• type: string

An identifier specific to the cohort

id Value Example

"cohort-id-123"

members

• type: array of “https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/Phenopacket.json [LINK]”

add description

members Value Example

{
   "id" : "phenopacketid-123",
   "metaData" : {
      "created" : "2016-06-29T12:03:03.240Z",
      "updates" : [
         {
            "timestamp" : "2007-12-03T10:15:30.00Z"
         }
      ]
   }
}

metaData

• type: https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/MetaData.json [LINK]

Structured definitions of the resources and ontologies used within the phenopacket. REQUIRED

metaData Value Example

{
   "created" : "2016-06-29T12:03:03.240Z",
   "updates" : [
      {
         "timestamp" : "2007-12-03T10:15:30.00Z"
      }
   ]
}

Cohort Value Example

{
   "id" : "cohort-id-123",
   "metaData" : {
      "created" : "2016-06-29T12:03:03.240Z",
      "updates" : [
         {
            "timestamp" : "2007-12-03T10:15:30.00Z"
         }
      ]
   }
}