Type: object
Description: metadata

Properties

created

• type: string

ISO8601 UTC timestamp for when this phenopacket was created in ISO “2018-03-01T00:00:00Z”

created Value Example

"2018-03-01T00:00:00Z"

createdBy

• type: string

some kind of identifier for the contributor/ program

createdBy Value Example

"samuel_jackson"

externalReferences

• type: array of “https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/ExternalReference.json [LINK]”

External identifiers for this message. These are considered different representation of the same record, not records which are in some other relation with the record at hand. For example this might be a PubMed reference to a study in which the individuals are reported.

externalReferences Value Example

[
   {
      "description" : "Cellosaurus cell line identifier",
      "id" : "cellosaurus:CVCL_0312"
   }
]

phenopacketSchemaVersion

• type: string

Used to create this phenopacket

phenopacketSchemaVersion Value Example

"1.0.2"

resources

• type: array of “https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/Resource.json [LINK]”

A listing of the ontologies/resources referenced in the phenopacket

resources Value Example

[
   {
      "id" : "12345",
      "name" : "The Human Phenotype Ontology",
      "url" : "http://purl.obolibrary.org/obo/hp.owl"
   },
   {
      "id" : "12345",
      "name" : "The Human Phenotype Ontology",
      "url" : "http://purl.obolibrary.org/obo/hp.owl"
   }
]

submittedBy

• type: string

Information about the person/organisation/network that has submitted this phenopacket

submittedBy Value Example

"add example"

updates

• type: array of “https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/Update.json [LINK]”

ISO8601 UTC timestamps at which this record was updated, in the format YYYY-MM-DDTHH:MM:SS.SSSZ e.g. 2007-12-03T10:15:30.00Z

updates Value Example

[
   {
      "timestamp" : "2007-12-03T10:15:30.00Z"
   }
]

Metadata Value Examples

{
   "created" : "2016-06-29T12:03:03.240Z",
   "updates" : [
      {
         "timestamp" : "2007-12-03T10:15:30.00Z"
      }
   ]
}

{
   "created" : "2016-06-29T12:03:03.240Z",
   "createdBy" : "samuel_jackson",
   "resources" : [
      {
         "id" : "geno",
         "iriPrefix" : "http://purl.obolibrary.org/obo/GENO_",
         "name" : "Genotype Ontology",
         "namespacePrefix" : "GENO",
         "url" : "http://purl.obolibrary.org/obo/geno.owl",
         "version" : "19-03-2018"
      }
   ],
   "updates" : [
      {
         "timestamp" : "2007-12-03T10:15:30.00Z"
      }
   ]
}